Bioinformatics, systems biology, artificial intelligence, data analysis, and synthetic biology.
Publications
, 2022. A genetic toolkit and gene switches to limit Mycoplasma growth for biosafety applications. Nat Commun 13(1):1910
, 2021. LoxTnSeq: random transposon insertions combined with cre/lox recombination and counterselection to generate large random genome reductions. Microb Biotechnol 14(6):2403-2419
, 2020. FASTQINS and ANUBIS: two bioinformatic tools to explore facts and artifacts in transposon sequencing and essentiality studies. Nucleic Acids Res 48(17):e102
, 2020. Inferring Active Metabolic Pathways from Proteomics and Essentiality Data. Cell Rep 31(9):107722
, 2019. The role of clonal communication and heterogeneity in breast cancer. BMC Cancer 19(1):666
, 2019. SynMyco transposon: engineering transposon vectors for efficient transformation of minimal genomes. DNA Res 26(4):327-339
, 2019. Unraveling the hidden universe of small proteins in bacterial genomes. Mol Syst Biol 15(2):e8290
, 2017. Alternative transcriptional regulation in genome-reduced bacteria. Curr Opin Microbiol 39:89-95
, 2016. High frequencies of antibiotic resistance genes in infants' meconium and early fecal samples. J Dev Orig Health Dis 7(1):35-44
, 2014. Engineering bacteria to form a biofilm and induce clumping in Caenorhabditis elegans. ACS Synth Biol 3(12):941-3
Publication list retrieved from NCBI using ImpactPubs
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