Bioinformatics, systems biology, artificial intelligence, data analysis, and synthetic biology.


Miravet-Verde S; Mazzolini R; Segura-Morales C; Broto A; Lluch-Senar M; Serrano L, 2024. ProTInSeq: transposon insertion tracking by ultra-deep DNA sequencing to identify translated large and small ORFs.  Nat Commun 15(1):2091

Anglada-Girotto M; Miravet-Verde S; Serrano L; Head SA, 2022. robustica: customizable robust independent component analysis.  BMC Bioinformatics 23(1):519

Piñero-Lambea C; Garcia-Ramallo E; Miravet-Verde S; Burgos R; Scarpa M; Serrano L; Lluch-Senar M, 2022. SURE editing: combining oligo-recombineering and programmable insertion/deletion of selection markers to efficiently edit the Mycoplasma pneumoniae genome.  Nucleic Acids Res 50(22):e127

Ciampi L; Mantica F; López-Blanch L; Permanyer J; Rodriguez-Marín C; Zang J; Cianferoni D; Jiménez-Delgado S; Bonnal S; Miravet-Verde S; Ruprecht V; Neuhauss SCF; Banfi S; Carrella S; Serrano L; Head SA; Irimia M, 2022. Specialization of the photoreceptor transcriptome by Srrm3-dependent microexons is required for outer segment maintenance and vision.  Proc Natl Acad Sci U S A 119(29):e2117090119

Broto A; Gaspari E; Miravet-Verde S; Dos Santos VAPM; Isalan M, 2022. A genetic toolkit and gene switches to limit Mycoplasma growth for biosafety applications.  Nat Commun 13(1):1910

Shaw D; Miravet-Verde S; Piñero-Lambea C; Serrano L; Lluch-Senar M, 2021. LoxTnSeq: random transposon insertions combined with cre/lox recombination and counterselection to generate large random genome reductions.  Microb Biotechnol 14(6):2403-2419

Miravet-Verde S; Burgos R; Delgado J; Lluch-Senar M; Serrano L, 2020. FASTQINS and ANUBIS: two bioinformatic tools to explore facts and artifacts in transposon sequencing and essentiality studies.  Nucleic Acids Res 48(17):e102

Montero-Blay A; Piñero-Lambea C; Miravet-Verde S; Lluch-Senar M; Serrano L, 2020. Inferring Active Metabolic Pathways from Proteomics and Essentiality Data.  Cell Rep 31(9):107722

Martín-Pardillos A; Valls Chiva Á; Bande Vargas G; Hurtado Blanco P; Piñeiro Cid R; Guijarro PJ; Hümmer S; Bejar Serrano E; Rodriguez-Casanova A; Diaz-Lagares Á; Castellvi J; Miravet-Verde S; Serrano L; Lluch-Senar M; Sebastian V; Bribian A; López-Mascaraque L; López-López R; Ramón Y Cajal S, 2019. The role of clonal communication and heterogeneity in breast cancer.  BMC Cancer 19(1):666

Montero-Blay A; Miravet-Verde S; Lluch-Senar M; Piñero-Lambea C; Serrano L, 2019. SynMyco transposon: engineering transposon vectors for efficient transformation of minimal genomes.  DNA Res 26(4):327-339

Miravet-Verde S; Ferrar T; Espadas-García G; Mazzolini R; Gharrab A; Sabido E; Serrano L; Lluch-Senar M, 2019. Unraveling the hidden universe of small proteins in bacterial genomes.  Mol Syst Biol 15(2):e8290

Miravet-Verde S; Lloréns-Rico V; Serrano L, 2017. Alternative transcriptional regulation in genome-reduced bacteria.  Curr Opin Microbiol 39:89-95

Gosalbes MJ; Vallès Y; Jiménez-Hernández N; Balle C; Riva P; Miravet-Verde S; de Vries LE; Llop S; Agersø Y; Sørensen SJ; Ballester F; Francino MP, 2016. High frequencies of antibiotic resistance genes in infants' meconium and early fecal samples.  J Dev Orig Health Dis 7(1):35-44

Dorado-Morales P; Iglesias A; Zafrilla G; Valero A; Torres A; Miravet-Verde S; de Loma J; Mañas M; Ruiz A; Corman A; Morales LJ; Peretó J; Vilanova C; Porcar M, 2014. Engineering bacteria to form a biofilm and induce clumping in Caenorhabditis elegans.  ACS Synth Biol 3(12):941-3

Publication list retrieved from NCBI using ImpactPubs