Resources

Software

Fast and quantitative estimation of interactions and stability between molecular species [link]
Framework for bacterial genome re-annotation and novel small proteins prediction [link]
Proteomics assistant tools for analysis of splice variants [link]
Transform ELMSeq sequencing files into sequence-specific DAMRatios [link]
Generate recYnH interaction score matrix [link]
Predict the helical behaviour of monomeric peptides [link]
Algorithm to predict aggregation nucleating regions in proteins [link]

Databases

Mycoplasma pneumoniae reference database [link]
Mycoplasma pneumoniae functional database. Joined effort with Dpt. of General Microbiology, University of Göttingen (Germany) [link]

Courses

FoldX In silico protein engineering: From modeling to docking
I edition (2018) [link]

Tissue Engineering Course: From Stem Cells to Organoids
II edition (2018) [link]
I edition (2017) [link]

Whole-cell modeling
II edition (2017) [link 1] [link2]
I edition (2016) [link 1] [link2]


Other Resources

Whole-cell model web of reference. By Jonathan Karr’s group at Mt. Sinai School of Medicine (US) [link]
Collaborative Project for the establishment of a Systems Biology framework to understand key features of Mycobacterium tuberculosis [link]